Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS001373
(GBE_INI2217)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Age started wearing glasses or contact lenses eye measurement 8,870
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001373/ScoringFiles/PGS001373.txt.gz
PGS001374
(GBE_INI2897)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Age stopped smoking smoking cessation 663
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001374/ScoringFiles/PGS001374.txt.gz
PGS001375
(GBE_INI22426)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Average heart rate heart rate 243
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001375/ScoringFiles/PGS001375.txt.gz
PGS001376
(GBE_INI21044)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Average number of times bowels opened per day bowel opening frequency 845
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001376/ScoringFiles/PGS001376.txt.gz
PGS001377
(GBE_INI30220)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Basophil percentage basophil percentage of leukocytes 3,205
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001377/ScoringFiles/PGS001377.txt.gz
PGS001378
(GBE_INI30160)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Basophil count basophil count 3,050
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001378/ScoringFiles/PGS001378.txt.gz
PGS001379
(GBE_INI22427)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Body surface area anthropometric measurement 850
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001379/ScoringFiles/PGS001379.txt.gz
PGS001380
(GBE_INI5264)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Corneal hysteresis (L) corneal hysteresis 2,240
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001380/ScoringFiles/PGS001380.txt.gz
PGS001381
(GBE_INI5256)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Corneal hysteresis (R) corneal hysteresis 2,500
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001381/ScoringFiles/PGS001381.txt.gz
PGS001382
(GBE_INI5265)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Corneal resistance factor (L) corneal resistance factor 2,390
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001382/ScoringFiles/PGS001382.txt.gz
PGS001383
(GBE_INI5257)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Corneal resistance factor (R) corneal resistance factor 3,941
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001383/ScoringFiles/PGS001383.txt.gz
PGS001384
(GBE_INI21060)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Degree bothered by feeling tired all the time in the last 3 months health-related quality of life measurement 1,526
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001384/ScoringFiles/PGS001384.txt.gz
PGS001385
(GBE_INI21051)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Degree bothered by headaches in the last 3 months health-related quality of life measurement 9
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001385/ScoringFiles/PGS001385.txt.gz
PGS001386
(GBE_INI21049)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Degree bothered by pain in arms/legs/joints in the past 3 months health-related quality of life measurement 534
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001386/ScoringFiles/PGS001386.txt.gz
PGS001387
(GBE_INI21058)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Degree bothered by urinary frequency/bladder irritability in the last 3 months health-related quality of life measurement 333
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001387/ScoringFiles/PGS001387.txt.gz
PGS001388
(GBE_QT_FC10003476)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Difficulty not smoking for 1 day smoking behavior trait 1
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001388/ScoringFiles/PGS001388.txt.gz
PGS001389
(GBE_INI1319)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Dried fruit intake diet measurement 989
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001389/ScoringFiles/PGS001389.txt.gz
PGS001390
(GBE_HC1084)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Duodenal ulcer (time-to-event) duodenal ulcer 220
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001390/ScoringFiles/PGS001390.txt.gz
PGS001391
(GBE_INI20453)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Ever taken cannabis Cannabis use 819
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001391/ScoringFiles/PGS001391.txt.gz
PGS001392
(GBE_FH1001)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Family history of lung cancer family history of lung cancer 312
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001392/ScoringFiles/PGS001392.txt.gz
PGS001393
(GBE_INI1807)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Father's age at death father's age at death 398
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001393/ScoringFiles/PGS001393.txt.gz
PGS001394
(GBE_INI20414)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Freq. of drinking alcohol alcohol consumption quality 860
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001394/ScoringFiles/PGS001394.txt.gz
PGS001395
(GBE_INI21025)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Frequency of discomfort/pain in abdomen in last 3 months Abdominal pain 256
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001395/ScoringFiles/PGS001395.txt.gz
PGS001396
(GBE_QT_FC1002060)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Frequency of unenthusiasm / disinterest in last 2 weeks emotional symptom measurement 2,431
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001396/ScoringFiles/PGS001396.txt.gz
PGS001397
(GBE_INI971)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Frequency of walking for pleasure in last 4 weeks physical activity measurement 1,276
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001397/ScoringFiles/PGS001397.txt.gz
PGS001398
(GBE_QT_FC1004570)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Friendship satisfaction friendship satisfaction measurement 659
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001398/ScoringFiles/PGS001398.txt.gz
PGS001399
(GBE_INI23002)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
GE / gI antigen for Varicella Zoster Virus Varicella zoster virus seropositivity 5
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001399/ScoringFiles/PGS001399.txt.gz
PGS001400
(GBE_INI30020)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Haemoglobin concentration hemoglobin measurement 15,602
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001400/ScoringFiles/PGS001400.txt.gz
PGS001401
(GBE_QT_FC1004548)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Health satisfaction health satisfaction measurement 1,814
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001401/ScoringFiles/PGS001401.txt.gz
PGS001402
(GBE_INI3148)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Heel bone mineral density (BMD) heel bone mineral density 14,251
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001402/ScoringFiles/PGS001402.txt.gz
PGS001403
(GBE_INI4105)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Heel bone mineral density (BMD) (L) heel bone mineral density 8,285
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001403/ScoringFiles/PGS001403.txt.gz
PGS001404
(GBE_INI4124)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Heel bone mineral density (BMD) (R) heel bone mineral density 9,637
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001404/ScoringFiles/PGS001404.txt.gz
PGS001405
(GBE_INI12144)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Height body height 3,166
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001405/ScoringFiles/PGS001405.txt.gz
PGS001406
(GBE_INI30300)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
High light scatter reticulocyte count reticulocyte measurement 15,856
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001406/ScoringFiles/PGS001406.txt.gz
PGS001407
(GBE_INI23022)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
HTLV-1 gag antigen for Human T-Lymphotropic Virus 1 blood protein measurement 66
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001407/ScoringFiles/PGS001407.txt.gz
PGS001408
(GBE_INI30280)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Immature reticulocyte fraction reticulocyte amount 10,871
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001408/ScoringFiles/PGS001408.txt.gz
PGS001409
(GBE_INI5262)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Intra-ocular pressure, corneal-compensated (L) intraocular pressure measurement 1,166
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001409/ScoringFiles/PGS001409.txt.gz
PGS001410
(GBE_INI5254)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Intra-ocular pressure, corneal-compensated (R) intraocular pressure measurement 1,563
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001410/ScoringFiles/PGS001410.txt.gz
PGS001411
(GBE_INI5263)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Intra-ocular pressure, Goldmann-correlated (L) intraocular pressure measurement 3,513
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001411/ScoringFiles/PGS001411.txt.gz
PGS001412
(GBE_INI22420)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
LV ejection fraction left ventricular ejection fraction measurement 266
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001412/ScoringFiles/PGS001412.txt.gz
PGS001413
(GBE_INI22423)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
LV stroke volume left ventricular stroke volume measurement 26
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001413/ScoringFiles/PGS001413.txt.gz
PGS001414
(GBE_INI30180)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Lymphocyte % lymphocyte percentage of leukocytes 15,143
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001414/ScoringFiles/PGS001414.txt.gz
PGS001415
(GBE_INI25073)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Mean FA in anterior limb of internal capsule on FA skeleton (L) neuroimaging measurement,
brain volume
731
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001415/ScoringFiles/PGS001415.txt.gz
PGS001416
(GBE_INI25072)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Mean FA in anterior limb of internal capsule on FA skeleton (R) neuroimaging measurement,
brain volume
1,280
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001416/ScoringFiles/PGS001416.txt.gz
PGS001417
(GBE_INI25059)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Mean FA in body of corpus callosum on FA skeleton neuroimaging measurement,
brain volume
754
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001417/ScoringFiles/PGS001417.txt.gz
PGS001418
(GBE_INI25071)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Mean FA in cerebral peduncle on FA skeleton (L) neuroimaging measurement,
brain volume
1,295
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001418/ScoringFiles/PGS001418.txt.gz
PGS001419
(GBE_INI25091)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Mean FA in cingulum cingulate gyrus on FA skeleton (L) neuroimaging measurement,
brain volume
895
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001419/ScoringFiles/PGS001419.txt.gz
PGS001420
(GBE_INI25090)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Mean FA in cingulum cingulate gyrus on FA skeleton (R) neuroimaging measurement,
brain volume
1,224
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001420/ScoringFiles/PGS001420.txt.gz
PGS001421
(GBE_INI25093)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Mean FA in cingulum hippocampus on FA skeleton (L) neuroimaging measurement,
brain volume
330
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001421/ScoringFiles/PGS001421.txt.gz
PGS001422
(GBE_INI25092)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Mean FA in cingulum hippocampus on FA skeleton (R) neuroimaging measurement,
brain volume
879
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001422/ScoringFiles/PGS001422.txt.gz