Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS003123
(ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Type 2 diabetes (T2D) type 2 diabetes mellitus 1,119,522
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003123/ScoringFiles/PGS003123.txt.gz
PGS003124
(ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 224,595
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003124/ScoringFiles/PGS003124.txt.gz
PGS003125
(ExPRSweb_Thinness_STILTS-UKHLS_PT_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 256
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003125/ScoringFiles/PGS003125.txt.gz
PGS003126
(ExPRSweb_Thinness_STILTS-UKHLS_PLINK_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 351
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003126/ScoringFiles/PGS003126.txt.gz
PGS003127
(ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 344,981
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003127/ScoringFiles/PGS003127.txt.gz
PGS003128
(ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 1,116,425
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003128/ScoringFiles/PGS003128.txt.gz
PGS003129
(ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 281,336
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003129/ScoringFiles/PGS003129.txt.gz
PGS003130
(ExPRSweb_Thinness_STILTS-UKHLS_PT_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 4,280
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003130/ScoringFiles/PGS003130.txt.gz
PGS003131
(ExPRSweb_Thinness_STILTS-UKHLS_PLINK_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 5,164
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003131/ScoringFiles/PGS003131.txt.gz
PGS003132
(ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 41,698
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003132/ScoringFiles/PGS003132.txt.gz
PGS003133
(ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Thinness body mass index 1,117,469
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003133/ScoringFiles/PGS003133.txt.gz
PGS003134
(ExPRSweb_TC_30690-irnt_LASSOSUM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 585,328
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003134/ScoringFiles/PGS003134.txt.gz
PGS003135
(ExPRSweb_TC_30690-irnt_PT_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 2,822
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003135/ScoringFiles/PGS003135.txt.gz
PGS003136
(ExPRSweb_TC_30690-irnt_PLINK_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 3,566
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003136/ScoringFiles/PGS003136.txt.gz
PGS003137
(ExPRSweb_TC_30690-irnt_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 7,459,292
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003137/ScoringFiles/PGS003137.txt.gz
PGS003138
(ExPRSweb_TC_30690-irnt_PRSCS_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003138/ScoringFiles/PGS003138.txt.gz
PGS003139
(ExPRSweb_TC_30690-raw_LASSOSUM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 569,518
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003139/ScoringFiles/PGS003139.txt.gz
PGS003140
(ExPRSweb_TC_30690-raw_PT_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 2,863
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003140/ScoringFiles/PGS003140.txt.gz
PGS003141
(ExPRSweb_TC_30690-raw_PLINK_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 3,604
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003141/ScoringFiles/PGS003141.txt.gz
PGS003142
(ExPRSweb_TC_30690-raw_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 7,459,288
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003142/ScoringFiles/PGS003142.txt.gz
PGS003143
(ExPRSweb_TC_30690-raw_PRSCS_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Total cholesterol total cholesterol measurement 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003143/ScoringFiles/PGS003143.txt.gz
PGS003144
(ExPRSweb_TG_30870-irnt_LASSOSUM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 762,608
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003144/ScoringFiles/PGS003144.txt.gz
PGS003145
(ExPRSweb_TG_30870-irnt_PT_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 9,693
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003145/ScoringFiles/PGS003145.txt.gz
PGS003146
(ExPRSweb_TG_30870-irnt_PLINK_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 13,680
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003146/ScoringFiles/PGS003146.txt.gz
PGS003147
(ExPRSweb_TG_30870-irnt_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 8,924,773
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003147/ScoringFiles/PGS003147.txt.gz
PGS003148
(ExPRSweb_TG_30870-irnt_PRSCS_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003148/ScoringFiles/PGS003148.txt.gz
PGS003149
(ExPRSweb_TG_30870-raw_LASSOSUM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 705,677
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003149/ScoringFiles/PGS003149.txt.gz
PGS003150
(ExPRSweb_TG_30870-raw_PT_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 5,113
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003150/ScoringFiles/PGS003150.txt.gz
PGS003151
(ExPRSweb_TG_30870-raw_PLINK_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 6,730
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003151/ScoringFiles/PGS003151.txt.gz
PGS003152
(ExPRSweb_TG_30870-raw_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 8,924,752
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003152/ScoringFiles/PGS003152.txt.gz
PGS003153
(ExPRSweb_TG_30870-raw_PRSCS_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Triglycerides triglyceride measurement 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003153/ScoringFiles/PGS003153.txt.gz
PGS003154
(ExPRSweb_VitB12_100013-irnt_LASSOSUM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 314,838
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003154/ScoringFiles/PGS003154.txt.gz
PGS003155
(ExPRSweb_VitB12_100013-irnt_PT_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 40,176
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003155/ScoringFiles/PGS003155.txt.gz
PGS003156
(ExPRSweb_VitB12_100013-irnt_PLINK_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 88,908
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003156/ScoringFiles/PGS003156.txt.gz
PGS003157
(ExPRSweb_VitB12_100013-irnt_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 10,318,270
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003157/ScoringFiles/PGS003157.txt.gz
PGS003158
(ExPRSweb_VitB12_100013-irnt_PRSCS_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 1,113,819
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003158/ScoringFiles/PGS003158.txt.gz
PGS003159
(ExPRSweb_VitB12_100013-raw_LASSOSUM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 313,902
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003159/ScoringFiles/PGS003159.txt.gz
PGS003160
(ExPRSweb_VitB12_100013-raw_PT_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 83,714
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003160/ScoringFiles/PGS003160.txt.gz
PGS003161
(ExPRSweb_VitB12_100013-raw_PLINK_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 190,297
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003161/ScoringFiles/PGS003161.txt.gz
PGS003162
(ExPRSweb_VitB12_100013-raw_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 10,318,272
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003162/ScoringFiles/PGS003162.txt.gz
PGS003163
(ExPRSweb_VitB12_100013-raw_PRSCS_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 1,113,819
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003163/ScoringFiles/PGS003163.txt.gz
PGS003164
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_LASSOSUM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 263,612
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003164/ScoringFiles/PGS003164.txt.gz
PGS003165
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PT_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 9
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003165/ScoringFiles/PGS003165.txt.gz
PGS003166
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PLINK_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 9
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003166/ScoringFiles/PGS003166.txt.gz
PGS003167
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_DBSLMM_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 9,805
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003167/ScoringFiles/PGS003167.txt.gz
PGS003168
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PRSCS_MGI_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 1,100,788
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003168/ScoringFiles/PGS003168.txt.gz
PGS003169
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_LASSOSUM_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 291,530
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003169/ScoringFiles/PGS003169.txt.gz
PGS003170
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PT_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 2,232
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003170/ScoringFiles/PGS003170.txt.gz
PGS003171
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PLINK_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 2,232
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003171/ScoringFiles/PGS003171.txt.gz
PGS003172
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_DBSLMM_UKB_20211120)
PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
Vitamin B12 vitamin B12 measurement 5,880
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003172/ScoringFiles/PGS003172.txt.gz