Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002723
(blood_WHITE_COUNT.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 White blood cell count leukocyte quantity 983,751
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002723/ScoringFiles/PGS002723.txt.gz
PGS002724
(GIGASTROKE_iPGS_EUR)
 PGP000333 |
Mishra A et al. Nature (2022)
 Ischemic stroke stroke,
Ischemic stroke		 1,213,574
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002724/ScoringFiles/PGS002724.txt.gz
PGS002725
(GIGASTROKE_iPGS_EAS)
 PGP000333 |
Mishra A et al. Nature (2022)
 Ischemic stroke stroke,
Ischemic stroke		 6,010,730
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002725/ScoringFiles/PGS002725.txt.gz
PGS002726
(PGS_MS_Brain)
 PGP000334 |
Shams H et al. Brain (2022)
 Multiple sclerosis multiple sclerosis 476,399
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002726/ScoringFiles/PGS002726.txt.gz
PGS002727
(PRS_PA)
 PGP000335 |
Namjou B et al. J Allergy Clin Immunol (2022)
 Asthma asthma 985,837
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002727/ScoringFiles/PGS002727.txt.gz
PGS002728
(PRS_hip)
 PGP000336 |
Sedaghati-Khayat B et al. Arthritis Rheumatol (2022)
 Hip osteoarthritis osteoarthritis, hip 44
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002728/ScoringFiles/PGS002728.txt.gz
PGS002729
(PRS_knee)
 PGP000336 |
Sedaghati-Khayat B et al. Arthritis Rheumatol (2022)
 Knee osteoarthritis osteoarthritis, knee 24
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002729/ScoringFiles/PGS002729.txt.gz
PGS002730
(GRSlipid_35)
 PGP000337 |
Mayerhofer E et al. Brain (2022)
 LDL lowering in response to statin low density lipoprotein cholesterol measurement,
response to statin		 35
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002730/ScoringFiles/PGS002730.txt.gz
PGS002731
(oA-PRS)
 PGP000339 |
Xicota L et al. Neurology (2022)
 Alzheimer's disease Alzheimer disease 17
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002731/ScoringFiles/PGS002731.txt.gz
PGS002732
(GRS_77)
 PGP000341 |
Vujkovic M et al. Nat Genet (2022)
 Chronic elevation of alanine aminotransferase serum alanine aminotransferase measurement 77
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002732/ScoringFiles/PGS002732.txt.gz
PGS002733
(GRS17_T2D)
 PGP000342 |
Pezzilli S et al. Diabetes Metab (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 17
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002733/ScoringFiles/PGS002733.txt.gz
PGS002734
(GRS_SBP_362)
 PGP000343 |
Marques-Vidal P et al. J Hypertens (2022)
 Systolic blood pressure systolic blood pressure 362
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002734/ScoringFiles/PGS002734.txt.gz
PGS002735
(PRS19)
 PGP000344 |
Bafligil C et al. Genet Med (2022)
 Endometrial cancer endometrial carcinoma 19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002735/ScoringFiles/PGS002735.txt.gz
PGS002736
(PRS24)
 PGP000344 |
Bafligil C et al. Genet Med (2022)
 Endometrial cancer endometrial carcinoma 24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002736/ScoringFiles/PGS002736.txt.gz
PGS002737
(PRS72)
 PGP000344 |
Bafligil C et al. Genet Med (2022)
 Endometrial cancer endometrial carcinoma 72
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002737/ScoringFiles/PGS002737.txt.gz
PGS002738
(PRS_AUD)
 PGP000345 |
Lai D et al. Alcohol Clin Exp Res (2022)
 Alcohol use disorder alcohol dependence 326,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002738/ScoringFiles/PGS002738.txt.gz
PGS002739
(PRS_gene)
 PGP000346 |
Lai D et al. Transl Psychiatry (2022)
 Alcohol use disorder alcohol dependence 858
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002739/ScoringFiles/PGS002739.txt.gz
PGS002740
(PRS22_PC)
 PGP000347 |
Yuan C et al. Ann Oncol (2022)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002740/ScoringFiles/PGS002740.txt.gz
PGS002741
(GRS127_POAG_META)
 PGP000352 |
Waksmunski AR et al. Ophthalmology (2022)
 Primary open-angle glaucoma open-angle glaucoma 127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002741/ScoringFiles/PGS002741.txt.gz
PGS002742
(PRS115_EAS)
 PGP000354 |
Ping J et al. Int J Cancer (2022)
 Colorectal cancer colorectal cancer 115
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002742/ScoringFiles/PGS002742.txt.gz
PGS002743
(PRS115_EUR)
 PGP000354 |
Ping J et al. Int J Cancer (2022)
 Colorectal cancer colorectal cancer 115
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002743/ScoringFiles/PGS002743.txt.gz
PGS002744
(PRS115_EUR_EAS)
 PGP000354 |
Ping J et al. Int J Cancer (2022)
 Colorectal cancer colorectal cancer 115
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002744/ScoringFiles/PGS002744.txt.gz
PGS002745
(metaPGS_RA)
 PGP000357 |
Ishigaki K et al. Nat Genet (2022)
 Rheumatoid arthritis rheumatoid arthritis 2,575
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002745/ScoringFiles/PGS002745.txt.gz
PGS002746
(PRS_ADHD)
 PGP000358 |
Lahey BB et al. J Psychiatr Res (2022)
 Attention-deficit hyperactivity disorder attention deficit hyperactivity disorder 513,659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002746/ScoringFiles/PGS002746.txt.gz
PGS002747
(PRS_GI)
 PGP000359 |
Liu Y et al. Cancer Med (2022)
 Gastrointestinal cancer Digestive System Carcinoma 106
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002747/ScoringFiles/PGS002747.txt.gz
PGS002748
(PRS_251)
 PGP000361 |
Chiou JS et al. BMC Med (2022)
 Height body height 251
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002748/ScoringFiles/PGS002748.txt.gz
PGS002749
(PRS10_TKR)
 PGP000362 |
Lacaze P et al. Arthritis Rheumatol (2022)
 Total knee replacement osteoarthritis, knee,
total knee arthroplasty		 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002749/ScoringFiles/PGS002749.txt.gz
PGS002750
(PRS37_THR)
 PGP000362 |
Lacaze P et al. Arthritis Rheumatol (2022)
 Total hip replacement total hip arthroplasty,
osteoarthritis, hip		 37
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002750/ScoringFiles/PGS002750.txt.gz
PGS002751
(GRSrare)
 PGP000363 |
Sapkota Y et al. Nat Med (2022)
 Body mass index (BMI) body mass index 14
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002751/ScoringFiles/PGS002751.txt.gz
PGS002752
(Drinks_per_week_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Alcohol consumption (drinks per week) alcohol consumption quality 1,089,551
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002752/ScoringFiles/PGS002752.txt.gz
PGS002753
(Alzheimer_s_disease_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Alzheimer's disease Alzheimer disease 1,092,011
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002753/ScoringFiles/PGS002753.txt.gz
PGS002754
(Asthma_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Asthma asthma 668,286
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002754/ScoringFiles/PGS002754.txt.gz
PGS002755
(Atopic_dermatitis_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Atopic dermatitis atopic eczema 1,090,702
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002755/ScoringFiles/PGS002755.txt.gz
PGS002756
(Atrial_fibrillation_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Atrial fibrillation atrial fibrillation 1,091,491
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002756/ScoringFiles/PGS002756.txt.gz
PGS002757
(eGFR_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Chronic kidney disease chronic kidney disease 1,090,783
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002757/ScoringFiles/PGS002757.txt.gz
PGS002758
(Colorectal_cancer_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Colorectal cancer colorectal cancer 1,087,843
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002758/ScoringFiles/PGS002758.txt.gz
PGS002759
(Depression_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Depression major depressive disorder 1,091,613
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002759/ScoringFiles/PGS002759.txt.gz
PGS002760
(Generalised_epilepsy_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Epilepsy epilepsy 835,537
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002760/ScoringFiles/PGS002760.txt.gz
PGS002761
(Glaucoma_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Glaucoma glaucoma 1,082,518
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002761/ScoringFiles/PGS002761.txt.gz
PGS002762
(Urate_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Gout gout 1,092,214
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002762/ScoringFiles/PGS002762.txt.gz
PGS002763
(Hip_osteoarthritis_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Hip osteoarthritis osteoarthritis, hip 1,052,273
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002763/ScoringFiles/PGS002763.txt.gz
PGS002764
(LDL_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Hypercholesterolemia Hypercholesterolemia 1,091,280
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002764/ScoringFiles/PGS002764.txt.gz
PGS002765
(SBP_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Hypertension hypertension 1,077,894
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002765/ScoringFiles/PGS002765.txt.gz
PGS002766
(Hypothyroidism_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Hypothyroidism hypothyroidism 1,092,122
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002766/ScoringFiles/PGS002766.txt.gz
PGS002767
(Knee_osteoarthritis_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Knee osteoarthritis osteoarthritis, knee 1,052,275
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002767/ScoringFiles/PGS002767.txt.gz
PGS002768
(BMD_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Osteoporosis osteoporosis,
heel bone mineral density		 1,091,549
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002768/ScoringFiles/PGS002768.txt.gz
PGS002769
(Rheumatoid_arthritis_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Seropositive rheumatoid arthritis rheumatoid arthritis 1,083,565
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002769/ScoringFiles/PGS002769.txt.gz
PGS002770
(Stroke_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Stroke stroke 1,088,719
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002770/ScoringFiles/PGS002770.txt.gz
PGS002771
(Type_2_diabetes_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,091,608
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002771/ScoringFiles/PGS002771.txt.gz
PGS002772
(Venous_thromboembolism_prscs)
 PGP000364 |
Mars N et al. Am J Hum Genet (2022)
 Venous thromboembolism venous thromboembolism 1,052,790
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002772/ScoringFiles/PGS002772.txt.gz
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