Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002773
(GTG_AF_maxCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident atrial fibrillation atrial fibrillation 265
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002773/ScoringFiles/PGS002773.txt.gz - Check Terms/Licenses
PGS002774
(GTG_AF_SCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident atrial fibrillation atrial fibrillation 216,837
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002774/ScoringFiles/PGS002774.txt.gz - Check Terms/Licenses
PGS002775
(GTG_CAD_maxCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident coronary artery disease coronary artery disease 1,059
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002775/ScoringFiles/PGS002775.txt.gz - Check Terms/Licenses
PGS002776
(GTG_CAD_SCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident coronary artery disease coronary artery disease 390,782
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002776/ScoringFiles/PGS002776.txt.gz - Check Terms/Licenses
PGS002777
(GTG_Hypertension_maxCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident hypertension hypertension 61,669
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002777/ScoringFiles/PGS002777.txt.gz - Check Terms/Licenses
PGS002778
(GTG_Hypertension_SCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident hypertension hypertension 309,759
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002778/ScoringFiles/PGS002778.txt.gz - Check Terms/Licenses
PGS002779
(GTG_T2D_maxCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident type 2 diabetes type 2 diabetes mellitus 46,353
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002779/ScoringFiles/PGS002779.txt.gz - Check Terms/Licenses
PGS002780
(GTG_T2D_SCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident type 2 diabetes type 2 diabetes mellitus 419,209
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002780/ScoringFiles/PGS002780.txt.gz - Check Terms/Licenses
PGS002781
(GLGC_2021_ALL_HDL_PRS_weights_PRS-CS)
 PGP000366 |
Kanoni S et al. Genome Biol (2022)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,239,184
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002781/ScoringFiles/PGS002781.txt.gz
PGS002782
(GLGC_2021_ALL_nonHDL_PRS_weights_PRS-CS)
 PGP000366 |
Kanoni S et al. Genome Biol (2022)
 nonHDL Cholesterol non-high density lipoprotein cholesterol measurement 1,239,184
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002782/ScoringFiles/PGS002782.txt.gz
PGS002783
(GLGC_2021_ALL_TC_PRS_weights_PT)
 PGP000366 |
Kanoni S et al. Genome Biol (2022)
 Total cholesterol total cholesterol measurement 10,699
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002783/ScoringFiles/PGS002783.txt.gz
PGS002784
(GLGC_2021_ALL_logTG_PRS_weights_PT)
 PGP000366 |
Kanoni S et al. Genome Biol (2022)
 Triglycerides triglyceride measurement 30,071
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002784/ScoringFiles/PGS002784.txt.gz
PGS002785
(SCZ_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Schizophrenia schizophrenia 964,422
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002785/ScoringFiles/PGS002785.txt.gz
PGS002786
(BD_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Bipolar disorder bipolar disorder 948,996
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002786/ScoringFiles/PGS002786.txt.gz
PGS002787
(BD1_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Type 1 bipolar disorder bipolar I disorder 937,511
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002787/ScoringFiles/PGS002787.txt.gz
PGS002788
(BD2_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Type 2 bipolar disorder bipolar II disorder 935,292
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002788/ScoringFiles/PGS002788.txt.gz
PGS002789
(MDD_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Major depressive disorder major depressive disorder 943,784
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002789/ScoringFiles/PGS002789.txt.gz
PGS002790
(ASD_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Autism spectrum disorder autism spectrum disorder 916,713
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002790/ScoringFiles/PGS002790.txt.gz
PGS002791
(PRS126_Pca)
 PGP000371 |
Ruan X et al. Prostate (2022)
 Prostate cancer prostate carcinoma 126
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002791/ScoringFiles/PGS002791.txt.gz
PGS002792
(PRS67_Pca)
 PGP000371 |
Ruan X et al. Prostate (2022)
 Prostate cancer prostate carcinoma 67
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002792/ScoringFiles/PGS002792.txt.gz
PGS002793
(PRS84_Pca)
 PGP000371 |
Ruan X et al. Prostate (2022)
 Prostate cancer prostate carcinoma 82
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002793/ScoringFiles/PGS002793.txt.gz
PGS002794
(PRS_VTE)
 PGP000375 |
Xie J et al. J Thromb Haemost (2022)
 Venous thromboembolism venous thromboembolism 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002794/ScoringFiles/PGS002794.txt.gz
PGS002795
(PRS_longetivity)
 PGP000378 |
Schoepf IC et al. Clin Infect Dis (2021)
 Longevity (>90th survival percentile) life span trait 4
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002795/ScoringFiles/PGS002795.txt.gz
PGS002796
(GRS232_Eur)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 232
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002796/ScoringFiles/PGS002796.txt.gz
PGS002797
(GRS67_His)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002797/ScoringFiles/PGS002797.txt.gz
PGS002798
(GRS128_Afr)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 128
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002798/ScoringFiles/PGS002798.txt.gz
PGS002799
(GRS138_EA)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002799/ScoringFiles/PGS002799.txt.gz
PGS002800
(GIANT_HEIGHT_YENGO_2022_PGS_WEIGHTS_SAS)
 PGP000382 |
Yengo L et al. Nature (2022)
 Height body height 1,156,741
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002800/ScoringFiles/PGS002800.txt.gz
PGS002801
(GIANT_HEIGHT_YENGO_2022_PGS_WEIGHTS_AFR)
 PGP000382 |
Yengo L et al. Nature (2022)
 Height body height 975,455
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002801/ScoringFiles/PGS002801.txt.gz
PGS002802
(GIANT_HEIGHT_YENGO_2022_PGS_WEIGHTS_ALL)
 PGP000382 |
Yengo L et al. Nature (2022)
 Height body height 1,103,042
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002802/ScoringFiles/PGS002802.txt.gz
PGS002803
(GIANT_HEIGHT_YENGO_2022_PGS_WEIGHTS_EAS)
 PGP000382 |
Yengo L et al. Nature (2022)
 Height body height 990,792
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002803/ScoringFiles/PGS002803.txt.gz
PGS002804
(GIANT_HEIGHT_YENGO_2022_PGS_WEIGHTS_EUR)
 PGP000382 |
Yengo L et al. Nature (2022)
 Height body height 1,099,005
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002804/ScoringFiles/PGS002804.txt.gz
PGS002805
(GIANT_HEIGHT_YENGO_2022_PGS_WEIGHTS_HIS)
 PGP000382 |
Yengo L et al. Nature (2022)
 Height body height 1,245,514
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002805/ScoringFiles/PGS002805.txt.gz
PGS002806
(gesta_duration)
 PGP000383 |
Solé-Navais P et al. Nat Genet (2023)
 Gestational duration gestational age 1,120,085
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002806/ScoringFiles/PGS002806.txt.gz
PGS002807
(PRSCS_SBP)
 PGP000384 |
Parcha V et al. Circ Genom Precis Med (2022)
 Systolic blood pressure systolic blood pressure 1,084,157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002807/ScoringFiles/PGS002807.txt.gz
PGS002808
(PGS20_LC)
 PGP000387 |
Qin N et al. Lancet Oncol (2022)
 Lung cancer lung carcinoma 20
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002808/ScoringFiles/PGS002808.txt.gz
PGS002809
(GRS_CAD)
 PGP000388 |
Ahmed R et al. Int J Cardiol Heart Vasc (2022)
 Coronary artery disease coronary artery disease 205
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002809/ScoringFiles/PGS002809.txt.gz
PGS002810
(GRS147_eGFR)
 PGP000390 |
Wuttke M et al. Nat Genet (2019)
 Estimated glomerular filtration rate glomerular filtration rate 147
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002810/ScoringFiles/PGS002810.txt.gz
PGS002811
(ASATadjbmi3_weights_select)
 PGP000391 |
Agrawal S et al. Nat Commun (2022)
 Abdominal adipose tissue volumes adjusted for BMI and height adipose amount 1,125,301
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002811/ScoringFiles/PGS002811.txt.gz
PGS002812
(GFATadjbmi3_weights_select)
 PGP000391 |
Agrawal S et al. Nat Commun (2022)
 Gluteofemoral adipose tissue volumes adjusted for BMI and height adipose amount 1,125,301
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002812/ScoringFiles/PGS002812.txt.gz
PGS002813
(VATadjbmi3_weights_select)
 PGP000391 |
Agrawal S et al. Nat Commun (2022)
 Visceral adipose tissue volumes adjusted for BMI and height visceral adipose tissue quantity 1,125,301
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002813/ScoringFiles/PGS002813.txt.gz
PGS002814
(AF-PRS)
 PGP000392 |
Miyazawa K et al. Nat Genet (2023)
 Atrial fibrillation atrial fibrillation 4,520
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002814/ScoringFiles/PGS002814.txt.gz
PGS002815
(ExPRSweb_AgeAtMenarche_ieu-a-1095_LASSOSUM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Age at menarche age at menarche 137,734
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002815/ScoringFiles/PGS002815.txt.gz
PGS002816
(ExPRSweb_AgeAtMenarche_ieu-a-1095_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Age at menarche age at menarche 13,852
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002816/ScoringFiles/PGS002816.txt.gz
PGS002817
(ExPRSweb_AgeAtMenarche_ieu-a-1095_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Age at menarche age at menarche 13,852
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002817/ScoringFiles/PGS002817.txt.gz
PGS002818
(ExPRSweb_AgeAtMenarche_ieu-a-1095_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Age at menarche age at menarche 991,712
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002818/ScoringFiles/PGS002818.txt.gz
PGS002819
(ExPRSweb_AgeAtMenarche_ieu-a-1095_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Age at menarche age at menarche 895,562
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002819/ScoringFiles/PGS002819.txt.gz
PGS002820
(ExPRSweb_AgeAtMenopause_ieu-a-1004_LASSOSUM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Age at menopause age at menopause 99,745
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002820/ScoringFiles/PGS002820.txt.gz
PGS002821
(ExPRSweb_AgeAtMenopause_ieu-a-1004_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Age at menopause age at menopause 159
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002821/ScoringFiles/PGS002821.txt.gz
PGS002822
(ExPRSweb_AgeAtMenopause_ieu-a-1004_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Age at menopause age at menopause 159
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002822/ScoringFiles/PGS002822.txt.gz
Showing 2701 to 2750 of 5091 rows