Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003723
(cEF)
 PGP000465 |
Hatoum AS et al. Biol Psychiatry (2022)
 Common executive function executive function measurement 6,683,248
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003723/ScoringFiles/PGS003723.txt.gz
PGS003724
(IQ)
 PGP000465 |
Hatoum AS et al. Biol Psychiatry (2022)
 Intelligence quotient intelligence 6,683,248
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003724/ScoringFiles/PGS003724.txt.gz
PGS003725
(GPS_Mult)
 PGP000466 |
Patel AP et al. Nat Med (2023)
 Coronary artery disease coronary artery disease 1,296,172
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003725/ScoringFiles/PGS003725.txt.gz
PGS003726
(GPS_CADANC)
 PGP000466 |
Patel AP et al. Nat Med (2023)
 Coronary artery disease coronary artery disease 1,296,172
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003726/ScoringFiles/PGS003726.txt.gz
PGS003727
(GPS_CADEUR)
 PGP000466 |
Patel AP et al. Nat Med (2023)
 Coronary artery disease coronary artery disease 1,125,113
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003727/ScoringFiles/PGS003727.txt.gz
PGS003728
(PS_T2D_183-AGEN)
 PGP000469 |
Wedekind LE et al. Diabetologia (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 183
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003728/ScoringFiles/PGS003728.txt.gz
PGS003729
(PS_T2D_293-DIAGRAM)
 PGP000469 |
Wedekind LE et al. Diabetologia (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 293
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003729/ScoringFiles/PGS003729.txt.gz
PGS003730
(PS_T2D_287-DIAMANTE)
 PGP000469 |
Wedekind LE et al. Diabetologia (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 287
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003730/ScoringFiles/PGS003730.txt.gz
PGS003731
(PS_T2D_282-SAS-DIAMANTE)
 PGP000469 |
Wedekind LE et al. Diabetologia (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 282
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003731/ScoringFiles/PGS003731.txt.gz
PGS003732
(PS_T2D_287-HIS-DIAMANTE)
 PGP000469 |
Wedekind LE et al. Diabetologia (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 287
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003732/ScoringFiles/PGS003732.txt.gz
PGS003733
(PS_T2D_287-EUR-DIAMANTE)
 PGP000469 |
Wedekind LE et al. Diabetologia (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 287
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003733/ScoringFiles/PGS003733.txt.gz
PGS003734
(PS_T2D_280-EAS-DIAMANTE)
 PGP000469 |
Wedekind LE et al. Diabetologia (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 280
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003734/ScoringFiles/PGS003734.txt.gz
PGS003735
(PS_T2D_276-AFR-DIAMANTE)
 PGP000469 |
Wedekind LE et al. Diabetologia (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 276
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003735/ScoringFiles/PGS003735.txt.gz
PGS003736
(PRS13_BlC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Bladder cancer urinary bladder cancer 13
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003736/ScoringFiles/PGS003736.txt.gz
PGS003737
(PRS26_BrC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Brain cancer brain neoplasm 26
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003737/ScoringFiles/PGS003737.txt.gz
PGS003738
(PRS136_BC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Breast cancer breast carcinoma 136
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003738/ScoringFiles/PGS003738.txt.gz
PGS003739
(PRS81_CoC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Colorectal cancer colorectal carcinoma 81
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003739/ScoringFiles/PGS003739.txt.gz
PGS003740
(PRS16_CU)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Corpus Uteri uterine corpus cancer 16
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003740/ScoringFiles/PGS003740.txt.gz
PGS003741
(PRS28_OC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Ovarian cancer ovarian carcinoma 28
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003741/ScoringFiles/PGS003741.txt.gz
PGS003742
(PRS19_PC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Pancreatic cancer pancreatic neoplasm 19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003742/ScoringFiles/PGS003742.txt.gz
PGS003743
(PRS118_PrC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Prostate cancer prostate carcinoma 118
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003743/ScoringFiles/PGS003743.txt.gz
PGS003744
(PRS14_RC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Renal cancer renal carcinoma 14
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003744/ScoringFiles/PGS003744.txt.gz
PGS003745
(PRS57_SM)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Skin Melanoma cutaneous melanoma 57
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003745/ScoringFiles/PGS003745.txt.gz
PGS003746
(PRS11_TC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Thyroid cancer thyroid carcinoma 11
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003746/ScoringFiles/PGS003746.txt.gz
PGS003747
(GRS341_SI)
 PGP000471 |
Tran JH et al. Transl Vis Sci Technol (2023)
 Smoking initiation smoking initiation 341
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003747/ScoringFiles/PGS003747.txt.gz
PGS003748
(GRS46_CPD)
 PGP000471 |
Tran JH et al. Transl Vis Sci Technol (2023)
 Cigarettes smoked per day cigarettes per day measurement 46
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003748/ScoringFiles/PGS003748.txt.gz
PGS003749
(ModelT1D_under25)
 PGP000472 |
Shoaib M et al. Genet Epidemiol (2023)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 6,612
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003749/ScoringFiles/PGS003749.txt.gz
PGS003750
(ModelT1D)
 PGP000472 |
Shoaib M et al. Genet Epidemiol (2023)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 7,835
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003750/ScoringFiles/PGS003750.txt.gz
PGS003751
(ModelT2D_over45)
 PGP000472 |
Shoaib M et al. Genet Epidemiol (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 354
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003751/ScoringFiles/PGS003751.txt.gz
PGS003752
(ModelT2D)
 PGP000472 |
Shoaib M et al. Genet Epidemiol (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 333
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003752/ScoringFiles/PGS003752.txt.gz
PGS003753
(PRS35445_ADHD)
 PGP000473 |
Sato JR et al. Genes Brain Behav (2023)
 Attention deficit hyperactivity disorder attention deficit hyperactivity disorder 35,445
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003753/ScoringFiles/PGS003753.txt.gz
PGS003754
(PRS22_OCstepwise)
 PGP000474 |
Hurwitz LM et al. JAMA Netw Open (2023)
 Nonmucinous Epithelial Ovarian Cancer ovarian carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003754/ScoringFiles/PGS003754.txt.gz
PGS003755
(wGRS_SLE)
 PGP000475 |
Kwon YC et al. Arthritis Rheumatol (2023)
 Systemic lupus erythematosus systemic lupus erythematosus 122
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003755/ScoringFiles/PGS003755.txt.gz
PGS003756
(wGRS_SLE_non-HLA)
 PGP000475 |
Kwon YC et al. Arthritis Rheumatol (2023)
 Systemic lupus erythematosus systemic lupus erythematosus 112
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003756/ScoringFiles/PGS003756.txt.gz
PGS003757
(wGRS_SLE_HLA)
 PGP000475 |
Kwon YC et al. Arthritis Rheumatol (2023)
 Systemic lupus erythematosus systemic lupus erythematosus 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003757/ScoringFiles/PGS003757.txt.gz
PGS003758
(BrCa_PRS_JPHC_JPGWAS)
 PGP000478 |
Ohbe H et al. Breast Cancer Res Treat (2022)
 Breast cancer breast carcinoma 46,861
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003758/ScoringFiles/PGS003758.txt.gz
PGS003759
(BrCa_PRS_JPHC_EURGWAS)
 PGP000478 |
Ohbe H et al. Breast Cancer Res Treat (2022)
 Breast cancer breast carcinoma 17,252
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003759/ScoringFiles/PGS003759.txt.gz
PGS003760
(PRS49_EOCRC)
 PGP000480 |
Wang H et al. Genome Med (2023)
 Early onset colorectal cancer colorectal cancer 49
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003760/ScoringFiles/PGS003760.txt.gz
PGS003761
(PRS165_AF)
 PGP000484 |
Zhang J et al. BMC Med (2023)
 Atrial fibrillation atrial fibrillation 165
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003761/ScoringFiles/PGS003761.txt.gz
PGS003762
(PRS57_amyloid)
 PGP000485 |
Mourtzi N et al. Alzheimers Dement (2023)
 Amyloid beta 42 beta-amyloid 1-42 measurement 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003762/ScoringFiles/PGS003762.txt.gz
PGS003763
(PRS44_PD)
 PGP000486 |
Zheng Z et al. JAMA Neurol (2023)
 Parkinson's disease Parkinson disease 44
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003763/ScoringFiles/PGS003763.txt.gz
PGS003764
(PRS78_sleep duration)
 PGP000487 |
Scammell BH et al. Hum Mol Genet (2023)
 Sleep duration sleep duration trait 78
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003764/ScoringFiles/PGS003764.txt.gz
PGS003765
(GRS.PCa.451)
 PGP000488 |
Wang A W et al. Nature Genetics (2023)
 Prostate cancer prostate carcinoma 451
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003765/ScoringFiles/PGS003765.txt.gz
PGS003766
(GRS.PCa.451.TOPMed)
 PGP000488 |
Wang A W et al. Nature Genetics (2023)
 Prostate cancer prostate carcinoma 451
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003766/ScoringFiles/PGS003766.txt.gz
PGS003767
(HDL_EUR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 12,656
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003767/ScoringFiles/PGS003767.txt.gz
PGS003768
(HDL_EUR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,489,018
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003768/ScoringFiles/PGS003768.txt.gz
PGS003769
(HDL_AFR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 198
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003769/ScoringFiles/PGS003769.txt.gz
PGS003770
(HDL_AFR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,678,653
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003770/ScoringFiles/PGS003770.txt.gz
PGS003771
(HDL_AFR_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,678,653
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003771/ScoringFiles/PGS003771.txt.gz
PGS003772
(HDL_AFR_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,155,488
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003772/ScoringFiles/PGS003772.txt.gz
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